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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4709559_4710626_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4709559 - 4710626

Intron Length:
1068

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAAAATG

5'SS Class:
strong_major

3'SS Sequence:
TATATCTTTAAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTTAT

U12 Branch Point Sequence:
ATATCTTTAAAG

Flanking Amino Acid:
SHAAQGQIKQAWNCSCARKL

Intron Amino Acid Position:
951

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.1
0.78
0.9
77.9
36.7

Major BPS
83.6
0.84
0.8
71.9
35.8

Major PPT
71.7
0.49
1.1
71.4
38.3

Minor 5ss
36.4
-1.5
3.1
48.5
47.2

Minor BPS
68.1
0.43
1.4
68.14
39

Associated Gene:

Gene:
WDR7

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4636520 - 4726132
89613

4599925 - 4726132
126208