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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4712000_4713188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4712000 - 4713188

Intron Length:

1189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

NLLASEASDKGNLPKYSHNS

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

88.4

0.86

0.7

29.6

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

WDR7

Ensembl Gene ID:

ENSAPLG00000014993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015663

4637127 - 4726132

89006

ENSAPLT00000043521

4617370 - 4726132

108763

ENSAPLT00000015656

4656683 - 4726132

69450

ENSAPLT00000043034

4636520 - 4726132

89613

ENSAPLT00000042060

4636520 - 4726132

89613

ENSAPLT00000046474

4660401 - 4726132

65732

ENSAPLT00000041973

4599925 - 4726132

126208

ENSAPLT00000043883

4636520 - 4726132

89613