Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4712_5097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4712 - 5097

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCTGC

5'SS Class:

major

3'SS Sequence:

TGTCTCCCCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCATAT

U12 Branch Point Sequence:

GTTGTGTGACCA

Flanking Amino Acid:

VLNQLQELDKTYVEVWPTQG

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.3

64.1

43.4

Major BPS

0.23

1.2

42.7

Major PPT

63.6

0.31

60.9

35.5

Minor 5ss

39.6

-1.2

2.9

51.1

45.5

Minor BPS

41.5

-0.6

2.3

56.01

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005719

2781 - 13437

10657