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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_47139208_47140060_F

Intron Information:

Intron Rank:

138959

Intron Class:

major

Intron Phase:

Intron Coordinates:

47139208 - 47140060

Intron Length:

853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTGTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

67.1

44.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.92

0.6

85.6

29.2

Minor 5ss

34.5

-1.8

3.5

39.9

46.1

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021614

47139042 - 47141248

2207