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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4718252_4718444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4718252 - 4718444

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

AATTGGTTGATG

Flanking Amino Acid:

LLVVCSKYWRVFDAGDYSLL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

90.6

0.91

0.7

88.7

28.3

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

44.4

-0.5

2.4

53.06

42.3

Associated Gene:

Gene:

WDR7

Ensembl Gene ID:

ENSAPLG00000014993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041973

4599925 - 4726132

126208

ENSAPLT00000043883

4636520 - 4726132

89613

ENSAPLT00000015663

4637127 - 4726132

89006

ENSAPLT00000043521

4617370 - 4726132

108763

ENSAPLT00000015656

4656683 - 4726132

69450

ENSAPLT00000043034

4636520 - 4726132

89613

ENSAPLT00000042060

4636520 - 4726132

89613

ENSAPLT00000046474

4660401 - 4726132

65732