Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4731066_4731892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4731066 - 4731892

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

ATTGTATCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCATTCTTAATT

Flanking Amino Acid:

RLAVVKFTMRGIARHLSARC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

69.7

0.44

64.4

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

78.1

0.96

1.1

84.08

37.1

Associated Gene:

Gene:

TXNL1

Ensembl Gene ID:

ENSAPLG00000015099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015775

4730815 - 4745435

14621