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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_473560_474770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

473560 - 474770

Intron Length:

1211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

TGGGGACTAATT

Flanking Amino Acid:

EANVREIFDKARQAAPCVLF

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

0.47

1.2

69.9

35.3

Major PPT

85.2

0.79

0.8

80.4

31.6

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

40.9

-0.6

2.2

58.28

44.8

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203