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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4737358_4738525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4737358 - 4738525

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

GATTTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTTACCTTAGCT

Flanking Amino Acid:

VKFQNVNSVTLFVQSNHGDE

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

71.4

0.53

1.1

63.4

Major PPT

0.74

0.8

81.5

35.9

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

77.3

0.93

1.5

93.23

34.8

Associated Gene:

Gene:

TXNL1

Ensembl Gene ID:

ENSAPLG00000015099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029352

4730815 - 4743508

12694

ENSAPLT00000017198

4730815 - 4745435

14621

ENSAPLT00000015775

4730815 - 4745435

14621

ENSAPLT00000041229

4730815 - 4739533

8719

ENSAPLT00000031863

4730815 - 4744836

14022