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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_47375952_47376419_F

Intron Information:

Intron Rank:

124592

Intron Class:

major

Intron Phase:

Intron Coordinates:

47375952 - 47376419

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTC

5'SS Class:

strong_major

3'SS Sequence:

GAATTCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GTTTAATGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

75.7

32.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

76.4

0.59

69.1

41.4

Minor 5ss

34.3

-1.8

3.6

49.9

46.6

Minor BPS

53.1

0.18

1.9

76.49

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020306

47375317 - 47376604

1288