Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4738631_4742481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4738631 - 4742481

Intron Length:

3851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTCTT

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTCCTTGTAACA

Flanking Amino Acid:

QATNMNDFKRLNFPFLKN*

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

71.6

40.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

87.2

0.84

0.8

84.6

Minor 5ss

-1.6

3.1

46.8

42.6

Minor BPS

52.1

0.06

67.58

39.4

Associated Gene:

Gene:

TXNL1

Ensembl Gene ID:

ENSAPLG00000015099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029352

4730815 - 4743508

12694