Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4738631_4743534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4738631 - 4743534

Intron Length:

4904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTCTT

5'SS Class:

major

3'SS Sequence:

TTAATTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

ATCTCCATATCA

Flanking Amino Acid:

QATNMNDFKRIIHMGELSIS

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

71.6

40.2

Major BPS

0.6

1.2

75.9

36.3

Major PPT

81.1

0.7

0.9

76.1

37.6

Minor 5ss

-1.6

3.1

46.8

42.6

Minor BPS

56.9

0.21

1.9

70.79

41.2

Associated Gene:

Gene:

TXNL1

Ensembl Gene ID:

ENSAPLG00000015099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017198

4730815 - 4745435

14621