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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_475080_475988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

475080 - 475988

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATCC

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAA

U12 Branch Point Sequence:

CAGGGTGTAAAG

Flanking Amino Acid:

ANLRKSPVAKDVDLDFLAKM

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

36.3

Major BPS

57.5

0.19

1.4

61.7

43.1

Major PPT

70.9

0.47

0.9

62.8

39.7

Minor 5ss

37.8

-1.4

3.3

51.1

45.6

Minor BPS

34.8

-1.2

2.2

32.44

41.2

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203