Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_47522764_47523120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47522764 - 47523120

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

AATTCTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

AATTCTATAATT

Flanking Amino Acid:

AFSYGQKPYKGMKGGEVAQM

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.9

30.1

Major BPS

75.5

0.63

1.1

34.4

Major PPT

76.9

0.61

0.9

67.3

42.8

Minor 5ss

-2.1

2.8

42.5

44.3

Minor BPS

66.3

0.59

1.5

80.61

34.8

Associated Gene:

Gene:

SYK

Ensembl Gene ID:

ENSAPLG00000003590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039802

47469844 - 47525233

55390

ENSAPLT00000003746

47469844 - 47525435

55592