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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_476145_476494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

476145 - 476494

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

TGTCCCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

CTGCCCACAGCT

Flanking Amino Acid:

RERQTNPSAMEVEEDDPVPE

Intron Amino Acid Position:

770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

55.8

43.4

Major BPS

0.28

1.1

63.1

35.8

Major PPT

74.2

0.54

0.9

33.9

Minor 5ss

30.4

-2.2

3.3

34.5

43.8

Minor BPS

44.4

-0.3

62.96

46.5

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203