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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_476650_477056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

476650 - 477056

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCCTG

5'SS Class:

major

3'SS Sequence:

CTGCTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CCCTTTTTCACT

Flanking Amino Acid:

LQQSRGFGSFRFPSGNQGGA

Intron Amino Acid Position:

821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

63.6

48.1

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

72.7

0.51

0.9

65.6

36.1

Minor 5ss

-0.3

2.9

64.9

46.4

Minor BPS

52.3

0.15

1.8

65.89

45.8

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203