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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_47726583_47726678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47726583 - 47726678

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

GTTTGGTTATTC

Flanking Amino Acid:

NALNKNLLKMMSKAVDALKS

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

68.1

0.45

73.5

28.6

Major PPT

85.4

0.8

0.6

81.5

23.5

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

44.8

-0.4

2.5

62.5

43.5

Associated Gene:

Gene:

AUH

Ensembl Gene ID:

ENSAPLG00000003415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035351

47678846 - 47736006

57161

ENSAPLT00000003481

47627489 - 47736006

108518