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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_47768749_47768817_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47768749 - 47768817

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AA

5'SS Sequence:

CAA|GTAGCAATG

5'SS Class:

weak_major

3'SS Sequence:

GAGTTGTCCACAA|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

TCTACTTTAGCA

Flanking Amino Acid:

LKKEHGPVDTNEDILLTEAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.2

60.1

44.8

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

38.3

-0.6

3.1

49.7

43.6

Minor 5ss

42.9

-0.8

3.2

57.4

41.5

Minor BPS

63.1

0.41

1.6

71.83

40.5

Associated Gene:

Gene:

NFIL3

Ensembl Gene ID:

ENSAPLG00000002204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002201

47767496 - 47769058

1563

ENSAPLT00000033889

47767496 - 47769058

1563