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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48040197_48041482_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48040197 - 48041482

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTAAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTGTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

CAAGATTTATTT

Flanking Amino Acid:

EALNIMEDNPDIFQTLRAKC

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

72.5

38.4

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

85.9

0.81

0.8

81.2

36.5

Minor 5ss

41.2

-1

2.5

50.7

45.8

Minor BPS

44.2

-0.3

1.8

54.27

41.9

Associated Gene:

Gene:

SPTLC1

Ensembl Gene ID:

ENSAPLG00000005976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006230

48033650 - 48066558

32909