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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48041580_48041865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48041580 - 48041865

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTTTTTTCCATA

Flanking Amino Acid:

CGRSFIIDHQRLSGQGYCFS

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

87.2

0.84

0.6

84.5

23.5

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

50.5

0.01

1.9

70.41

36.7

Associated Gene:

Gene:

SPTLC1

Ensembl Gene ID:

ENSAPLG00000005976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006230

48033650 - 48066558

32909