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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48045477_48047015_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48045477 - 48047015

Intron Length:

1539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTC

5'SS Class:

major

3'SS Sequence:

TCTTTCTCCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CTTTCTCCAAAG

Flanking Amino Acid:

LKEQEIEDQKNPRKARVTRR

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

67.4

38.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

73.3

0.52

74.7

27.9

Minor 5ss

39.6

-1.2

3.6

58.4

46.5

Minor BPS

46.8

-0.3

57.57

43.9

Associated Gene:

Gene:

SPTLC1

Ensembl Gene ID:

ENSAPLG00000005976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006230

48033650 - 48066558

32909