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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48048932_48055380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48048932 - 48055380

Intron Length:

6449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCAGTATT

5'SS Class:

major

3'SS Sequence:

TTCTCTCAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TTTCTCTCAAAC

Flanking Amino Acid:

CGPRGFYGTFDVHLELEDRL

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.3

83.5

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

73.6

0.53

0.9

70.3

34.1

Minor 5ss

37.2

-1.4

2.9

49.2

40.8

Minor BPS

60.7

0.31

1.6

73.49

36.7

Associated Gene:

Gene:

SPTLC1

Ensembl Gene ID:

ENSAPLG00000005976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006230

48033650 - 48066558

32909