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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48055454_48055869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48055454 - 48055869

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TTTCACATAATT

Flanking Amino Acid:

LGLLDNEKVKSAAQASLKKY

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

77.7

0.69

83.3

27.7

Major PPT

0.45

1.1

70.1

39.4

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

61.7

0.45

1.8

83.94

36.2

Associated Gene:

Gene:

SPTLC1

Ensembl Gene ID:

ENSAPLG00000005976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006230

48033650 - 48066558

32909