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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48056943_48065075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48056943 - 48065075

Intron Length:

8133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCAG

5'SS Class:

major

3'SS Sequence:

TCTCGTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TCCTTTTTAAGT

Flanking Amino Acid:

LQERSDLTPKEKEELIEEWQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.2

43.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

83.2

0.75

0.8

80.6

31.5

Minor 5ss

36.2

-1.6

3.2

46.2

49.1

Minor BPS

62.5

0.47

1.6

74.22

43.6

Associated Gene:

Gene:

SPTLC1

Ensembl Gene ID:

ENSAPLG00000005976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006230

48033650 - 48066558

32909