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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48065184_48066239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48065184 - 48066239

Intron Length:

1056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGGGC

5'SS Class:

major

3'SS Sequence:

GCTTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAC

U12 Branch Point Sequence:

TGTGCTTTATTT

Flanking Amino Acid:

LVEMVQAFYEAPAYHLILEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.7

39.4

Major BPS

69.3

0.48

1.1

66.7

Major PPT

84.1

0.77

0.8

81.1

35.5

Minor 5ss

23.1

-3.1

3.4

32.1

42.7

Minor BPS

59.8

0.39

1.7

76.04

41.4

Associated Gene:

Gene:

SPTLC1

Ensembl Gene ID:

ENSAPLG00000005976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006230

48033650 - 48066558

32909