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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48129233_48129652_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

48129233 - 48129652

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AACTCATTAAAA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

80.9

0.7

0.9

72.5

42.4

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

58.3

0.26

1.7

65.95

39.6

Associated Gene:

Gene:

CDC42SE2

Ensembl Gene ID:

ENSAPLG00000026244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028329

48128838 - 48194060

65223