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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48134678_48159669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48134678 - 48159669

Intron Length:

24992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

ACCTCCCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTCCTTACCT

Flanking Amino Acid:

NCCIAEQPQPKRRRRIDRSM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.6

0.58

0.8

65.7

35.4

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

79.3

1.5

92.9

35.6

Associated Gene:

Gene:

CDC42SE2

Ensembl Gene ID:

ENSAPLG00000026244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038958

48132423 - 48159996

27574

ENSAPLT00000028329

48128838 - 48194060

65223