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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48191513_48193951_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

48191513 - 48193951

Intron Length:

2439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAACTA

5'SS Class:

major

3'SS Sequence:

CCCTGTTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ATACTTACACTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

65.2

40.7

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

73.1

0.52

0.8

64.9

36.4

Minor 5ss

33.8

-1.8

3.5

47.8

47.6

Minor BPS

36.4

-1.1

1.7

36.66

32.6

Associated Gene:

Gene:

CDC42SE2

Ensembl Gene ID:

ENSAPLG00000026244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028329

48128838 - 48194060

65223