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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_482710_487119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

482710 - 487119

Intron Length:

4410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TTTTCCCCACAG

Flanking Amino Acid:

VYTANISLKEALCGCTVNIP

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

82.2

0.73

0.7

76.7

25.5

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

45.8

-0.4

2.2

45.2

Associated Gene:

Gene:

DNAJB5

Ensembl Gene ID:

ENSAPLG00000002110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026944

482401 - 493068

10668