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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48347300_48347954_R

Intron Information:

Intron Rank:

137603

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48347300 - 48347954

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCAAAACCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATGCAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.8

29.7

Major BPS

100

1.24

0.5

100

Major PPT

56.8

0.15

47.4

39.1

Minor 5ss

27.5

-2.6

2.7

28.2

37.3

Minor BPS

47.7

-0.1

2.3

71.17

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031549

48346531 - 48348916

2386

ENSAPLT00000044667

48345748 - 48348916

3169