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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48348022_48348529_R

Intron Information:

Intron Rank:

137604

Intron Class:

major

Intron Phase:

Intron Coordinates:

48348022 - 48348529

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.8

0.65

0.8

72.8

32.1

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

53.6

0.19

81.24

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031549

48346531 - 48348916

2386