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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48369597_48371554_F

Intron Information:

Intron Rank:

139522

Intron Class:

major

Intron Phase:

Intron Coordinates:

48369597 - 48371554

Intron Length:

1958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GCACTCTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTTTCCTACAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

79.7

0.74

79.6

35.6

Major PPT

70.9

0.47

0.9

36.5

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

54.8

0.23

2.4

83.33

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031399

48366211 - 48380958

14748