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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48430468_48435651_F

Intron Information:

Intron Rank:

150993

Intron Class:

major

Intron Phase:

Intron Coordinates:

48430468 - 48435651

Intron Length:

5184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGCATC

5'SS Class:

major

3'SS Sequence:

TCCTTCCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

AAGTCTTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

1.1

77.3

37.8

Major BPS

78.2

0.7

79.9

32.6

Major PPT

80.7

0.69

0.7

73.3

31.7

Minor 5ss

40.3

-1.1

2.8

52.4

44.4

Minor BPS

49.4

-0.1

1.7

52.69

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035037

48430067 - 48436705

6639