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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48436665_48437297_F

Intron Information:

Intron Rank:

150996

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48436665 - 48437297

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTGTACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTCCTGGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

52.3

0.05

1.2

50.1

46.8

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

68.1

0.56

1.6

80.79

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043408

48434540 - 48437741

3202

ENSAPLT00000041204

48434854 - 48437741

2888

ENSAPLT00000040759

48430583 - 48437741

7159