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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4849848_4888866_R

Intron Information:

Intron Rank:

148876

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4849848 - 4888866

Intron Length:

39019

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTCCCCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

59.8

0.22

1.1

61.7

32.9

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

58.9

0.28

78.36

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023775

4849659 - 4901766

52108