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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48541139_48575900_F

Intron Information:

Intron Rank:

149259

Intron Class:

major

Intron Phase:

Intron Coordinates:

48541139 - 48575900

Intron Length:

34762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

CTTTATTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATTCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

63.9

42.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.2

0.77

0.8

77.1

36.8

Minor 5ss

30.6

-2.2

3.3

33.6

41.9

Minor BPS

66.7

0.6

1.5

79.34

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032627

48517647 - 48576097

58451