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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48579963_48584609_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48579963 - 48584609

Intron Length:

4647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCTCC

5'SS Class:

major

3'SS Sequence:

CTTTGAAAATGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

TGTTCTTTGAAA

Flanking Amino Acid:

KPECPLCKRRLHGMCVLLLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

62.8

38.8

Major BPS

74.8

0.62

39.8

Major PPT

46.5

-0.2

1.7

53.5

44.2

Minor 5ss

39.2

-1.2

2.9

43.1

44.2

Minor BPS

69.3

0.6

1.4

76.25

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040334

48579921 - 48587735

7815