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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48631015_48701674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48631015 - 48701674

Intron Length:

70660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTGAA

5'SS Class:

major

3'SS Sequence:

TCTTTTATTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTGTCTTTTATT

Flanking Amino Acid:

LLLKRLEMNKMQQLFHENYE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

70.3

35.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.5

0.78

0.7

35.1

Minor 5ss

43.6

-0.7

57.6

47.1

Minor BPS

61.9

0.45

1.6

74.98

42.6

Associated Gene:

Gene:

CHSY3

Ensembl Gene ID:

ENSAPLG00000020123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041742

48629449 - 48702202

72754