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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_487719_490128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

487719 - 490128

Intron Length:

2410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

AACGCCTCATCT

Flanking Amino Acid:

RAVYDQYGEEGLKTGGGSSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

84.8

0.78

0.7

76.5

32.1

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

-0

1.9

63.77

46.2

Associated Gene:

Gene:

DNAJB5

Ensembl Gene ID:

ENSAPLG00000002110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026944

482401 - 493068

10668

ENSAPLT00000002106

486393 - 490373

3981