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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48848436_48849300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48848436 - 48849300

Intron Length:

865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCAC

5'SS Class:

major

3'SS Sequence:

GTTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

ACTGAGTTCATT

Flanking Amino Acid:

LHSNLASHIKENPNDLQFWM

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

65.9

39.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

86.7

0.83

0.7

85.5

29.2

Minor 5ss

31.1

-2.2

3.3

41.5

45.2

Minor BPS

40.2

-0.6

2.5

58.35

45.3

Associated Gene:

Gene:

MINAR2

Ensembl Gene ID:

ENSAPLG00000018121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024671

48848189 - 48857324

9136