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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48849547_48857000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48849547 - 48857000

Intron Length:

7454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TCTGCTCTAACT

Flanking Amino Acid:

QQWHNRIYLQREKKNTTELP

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

72.3

0.55

73.3

28.9

Major PPT

82.9

0.74

0.9

77.1

37.1

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

62.2

0.46

1.8

80.09

42.2

Associated Gene:

Gene:

MINAR2

Ensembl Gene ID:

ENSAPLG00000018121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024671

48848189 - 48857324

9136