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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4888639_4888866_R

Intron Information:

Intron Rank:

148891

Intron Class:

major

Intron Phase:

Intron Coordinates:

4888639 - 4888866

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

CAGGCAAAAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

80.8

0.69

0.8

72.7

37.6

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

37.6

-0.9

41.01

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027561

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045958

4888540 - 4901766

13227