Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_48917462_48925187_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48917462 - 48925187

Intron Length:

7726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGGCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ATGTACTTACCT

Flanking Amino Acid:

PTASFCQEMQHVICTGLWCK

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.7

90.9

28.7

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

78.5

0.64

0.9

74.1

Minor 5ss

39.3

-1.2

2.8

50.6

45.9

Minor BPS

62.1

0.46

1.8

79.38

42.5

Associated Gene:

Gene:

ADAMTS19

Ensembl Gene ID:

ENSAPLG00000004624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004766

48863204 - 49057200

193997