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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49024025_49055491_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
49024025 - 49055491

Intron Length:
31467

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGATGA

5'SS Class:
strong_major

3'SS Sequence:
TTTTCCTTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TGATTCTTATCT

Flanking Amino Acid:
FASFSTCGGLMGFIQINEDF

Intron Amino Acid Position:
233

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.8
0.77
0.9
70.5
36.3

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
93
0.97
0.6
88.6
20.7

Minor 5ss
37.4
-1.4
3
44.6
45.1

Minor BPS
68.1
0.65
1.6
81.39
39.9

Associated Gene:

Gene:
ADAMTS19

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

48863204 - 49057200
193997