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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_490374_492722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

490374 - 492722

Intron Length:

2349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAGACC

5'SS Class:

major

3'SS Sequence:

TCTCTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGCAG

U12 Branch Point Sequence:

TCGCCTTGCAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

63.8

40.7

Major BPS

45.5

-0.2

1.7

60.7

45.9

Major PPT

83.5

0.75

0.8

80.5

31.5

Minor 5ss

32.4

-2

3.2

35.6

Minor BPS

41.1

-0.7

47.79

42.2

Associated Gene:

Gene:

DNAJB5

Ensembl Gene ID:

ENSAPLG00000002110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026944

482401 - 493068

10668