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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49056103_49057040_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
49056103 - 49057040

Intron Length:
938

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTGCG

5'SS Class:
strong_major

3'SS Sequence:
GGCTTTCCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAA

U12 Branch Point Sequence:
ACTCATTTAAAG

Flanking Amino Acid:
LCVLSSGLAAGLHASEDSEE

Intron Amino Acid Position:
29

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.1
1.04
0.8
78.8
35.5

Major BPS
81.6
0.78
0.8
82
24.9

Major PPT
71.6
0.49
0.9
64.8
36.6

Minor 5ss
33
-1.9
3.1
41.3
45.2

Minor BPS
49.2
-0.1
1.7
53.56
41

Associated Gene:

Gene:
ADAMTS19

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

48863204 - 49057200
193997