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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4909309_4909627_F

Intron Information:

Intron Rank:

144043

Intron Class:

major

Intron Phase:

Intron Coordinates:

4909309 - 4909627

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCGTCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TGAAATGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

78.3

0.64

0.8

72.5

32.2

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

45.2

-0.2

2.1

63.21

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039846

4908896 - 4909778

883