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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49196751_49197136_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49196751 - 49197136

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGTGCC

5'SS Class:

major

3'SS Sequence:

TTCTCCCCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TGGGCCTTCATT

Flanking Amino Acid:

VRSVVLFGVETHVCIQQTAL

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

68.7

34.6

Major BPS

73.9

0.59

30.2

Major PPT

79.2

0.66

0.7

74.2

Minor 5ss

41.8

-0.9

53.3

Minor BPS

0.27

1.9

72.1

45.3

Associated Gene:

Gene:

ISOC1

Ensembl Gene ID:

ENSAPLG00000030121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025661

49191768 - 49210153

18386

ENSAPLT00000005180

49174593 - 49210153

35561