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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49197341_49197499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49197341 - 49197499

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTTTGTACACT

Flanking Amino Acid:

GDIISVGQRLLQGARLLGIP

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

72.1

33.4

Major BPS

0.75

78.6

Major PPT

83.4

0.75

0.8

76.8

31.2

Minor 5ss

46.7

-0.3

2.4

43.5

Minor BPS

46.9

-0.1

2.6

78.66

44.1

Associated Gene:

Gene:

ISOC1

Ensembl Gene ID:

ENSAPLG00000030121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025661

49191768 - 49210153

18386

ENSAPLT00000005180

49174593 - 49210153

35561