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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49197620_49209385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49197620 - 49209385

Intron Length:

11766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

CTGACATTAAAA

Flanking Amino Acid:

KVRLVPLQIQMTTLGNLTPS

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

52.2

0.07

1.8

62.76

42.9

Associated Gene:

Gene:

ISOC1

Ensembl Gene ID:

ENSAPLG00000030121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025661

49191768 - 49210153

18386

ENSAPLT00000005180

49174593 - 49210153

35561