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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_49270558_49270883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

49270558 - 49270883

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGGGGC

5'SS Class:

major

3'SS Sequence:

TCCTGGGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CCATTCCTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.7

39.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

70.7

0.47

60.5

44.8

Minor 5ss

23.1

-3.1

3.4

32.1

42.7

Minor BPS

49.4

-0.1

1.8

51.93

43.2

Associated Gene:

Gene:

SLC27A6

Ensembl Gene ID:

ENSAPLG00000005067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005242

49229448 - 49271066

41619